Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PDGFBP01127 RNA5SP87-201ENST00000384155 118 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 OR4K12P-201ENST00000406538 961 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 SEPT7P8-201ENST00000413308 775 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFBP01127 BX119904.3-201ENST00000428194 957 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFBP01127 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFBP01127 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFBP01127 PRPF38AP2-201ENST00000438179 851 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFBP01127 AL162739.1-201ENST00000450606 307 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AL356981.1-201ENST00000454879 684 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 NDUFA12P1-201ENST00000455914 406 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AL022319.1-201ENST00000458183 1167 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AC009127.1-201ENST00000467090 155 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 RN7SL354P-201ENST00000469282 294 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 PDCL3P4-201ENST00000489621 720 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFBP01127 SNORD116-30-201ENST00000516468 85 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFBP01127 AC073581.1-201ENST00000519036 575 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFBP01127 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFBP01127 OR5AN2P-201ENST00000534535 896 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 MIR132-201ENST00000591554 101 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 AC093297.3-201ENST00000607056 2517 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 AP000432.2-201ENST00000624164 2048 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 AC073365.1-203ENST00000641055 1992 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFBP01127 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 AC110373.1-201ENST00000505994 3505 ntBASIC5.61□□□□□ -1.51
PDGFBP01127 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 AL121768.1-201ENST00000613917 2544 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AC130304.1-201ENST00000622942 2385 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PDGFBP01127 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDGFBP01127 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 SNORA17.1-201ENST00000362945 126 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 MIR23A-201ENST00000385245 73 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AL138878.2-201ENST00000440581 1241 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AC092106.1-201ENST00000444291 373 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AC012512.1-201ENST00000446594 718 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 TRY2P-201ENST00000448860 689 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 RPS23P2-201ENST00000463671 415 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 AC105384.2-201ENST00000508433 640 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PDGFBP01127 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.6□□□□□ -1.51
PDGFBP01127 AC126615.2-201ENST00000553003 515 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 AL121839.1-201ENST00000556233 1185 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.6□□□□□ -1.51
PDGFBP01127 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFBP01127 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFBP01127 AC095055.1-201ENST00000603472 1113 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 LSM1P2-201ENST00000604911 322 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 AC090527.3-201ENST00000619041 548 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFBP01127 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 AP001284.1-201ENST00000528393 2118 ntBASIC5.6□□□□□ -1.51
PDGFBP01127 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFBP01127 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFBP01127 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFBP01127 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PDGFBP01127 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PDGFBP01127 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms