Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 SNORA19.2-201ENST00000516013 114 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 RN7SKP116-201ENST00000516902 319 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 COX6CP5-201ENST00000527162 228 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 BNIP3P23-201ENST00000599655 511 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 MLECP1-201ENST00000615893 709 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AL355974.3-201ENST00000617383 467 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC090971.5-201ENST00000621102 293 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AL391666.1-201ENST00000442570 2764 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL25A1Q9BXS0 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 OR9K1P-201ENST00000326513 941 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RNU6-1309P-201ENST00000363305 108 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RNU6-501P-201ENST00000364072 100 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RNU6-374P-201ENST00000364146 108 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RNA5SP284-201ENST00000384547 118 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RPS24P12-201ENST00000402084 394 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RPL5P18-201ENST00000406671 891 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AL035422.1-201ENST00000414193 397 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 GTF2IP23-201ENST00000423746 351 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RPSAP65-201ENST00000429660 595 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 FTH1P20-201ENST00000434913 548 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 LDHAP2-201ENST00000437325 985 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 SS18L2P1-201ENST00000445923 213 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 GAPDHP17-201ENST00000449858 1001 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC009963.3-201ENST00000458090 486 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 BX323845.2-201ENST00000458382 234 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC023141.9-201ENST00000458734 412 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RNU7-140P-201ENST00000459546 60 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RN7SL39P-201ENST00000462264 297 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC021660.1-201ENST00000465006 554 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 NPM1P52-201ENST00000518264 846 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 IGKV2-29-201ENST00000521304 372 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 IGKV2-18-201ENST00000522607 343 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 CYCSP38-201ENST00000559840 322 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 SNRPGP17-201ENST00000603780 214 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 AC129915.3-201ENST00000634128 948 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 U2.22-201ENST00000636441 106 ntBASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms