Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MFSD8-217ENST00000641178 4374 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 MTCO1P11-201ENST00000429111 1528 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL359396.1-201ENST00000623151 2376 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR10J6P-201ENST00000289731 930 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 RNU1-65P-201ENST00000363919 148 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 SNORA63C-201ENST00000364578 129 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 SNORA7A-201ENST00000384765 139 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL158825.1-201ENST00000414735 521 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 MTND3P17-201ENST00000416968 344 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 RNF19BPX-201ENST00000426224 625 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 SUMO1P3-201ENST00000439961 304 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC010878.1-201ENST00000456500 1047 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC013267.1-201ENST00000458227 267 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 RPL5P13-201ENST00000462840 709 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 MTND6P6-201ENST00000478031 263 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 HPRT1P3-201ENST00000539521 576 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC012146.2-201ENST00000576545 416 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 MIR378C-201ENST00000578683 81 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC060780.3-201ENST00000589464 80 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 uc_338.29-201ENST00000615099 168 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR8G3P-202ENST00000641572 1255 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AC005614.1-201ENST00000598952 3653 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 AP003175.1-201ENST00000641383 6658 ntBASIC8.22□□□□□ -1.09
TRIM47Q96LD4 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TRIM47Q96LD4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.21□□□□□ -1.09
TRIM47Q96LD4 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RNU1-5P-201ENST00000362684 144 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RNA5SP472-201ENST00000363868 119 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 SNORA64.3-201ENST00000365647 134 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RPL24P7-201ENST00000399435 453 ntBASIC8.21□□□□□ -1.1
TRIM47Q96LD4 RNU2-47P-201ENST00000410649 186 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms