Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC068234.2-201ENST00000619646 522 ntBASIC7.38□□□□□ -1.23
TRIM11Q96F44 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM11Q96F44 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM11Q96F44 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
TRIM11Q96F44 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 MTND5P26-201ENST00000426018 1752 ntBASIC7.38□□□□□ -1.23
TRIM11Q96F44 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM11Q96F44 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TRIM11Q96F44 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM11Q96F44 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 Z93929.1-201ENST00000418200 1475 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 Y_RNA.192-201ENST00000363977 102 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 RN7SKP55-201ENST00000364888 307 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 RNA5SP427-201ENST00000365323 119 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 RNU6-1005P-201ENST00000384519 107 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 TRAV35-201ENST00000390462 330 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 SNORA40.2-201ENST00000390847 128 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 ST13P16-201ENST00000401760 781 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 ATF1P1-201ENST00000406040 927 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 RN7SKP236-201ENST00000410635 284 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 PAICSP7-201ENST00000419829 962 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 RPL21P32-201ENST00000419877 477 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC009784.1-201ENST00000426484 460 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 RNA5SP269-201ENST00000459032 137 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC069439.1-201ENST00000494739 167 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 RN7SL104P-201ENST00000498686 293 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AP001646.2-201ENST00000528645 1156 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 NDUFA3P2-201ENST00000531434 232 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AP000619.3-201ENST00000535634 1127 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC008127.2-201ENST00000549925 1075 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC092375.1-201ENST00000550410 637 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC026458.1-201ENST00000564330 438 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AL391840.1-201ENST00000571144 367 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AL589765.5-201ENST00000596133 515 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 AL049634.3-201ENST00000604968 457 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 AC132825.8-201ENST00000640783 297 ntBASIC7.37□□□□□ -1.23
TRIM11Q96F44 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM11Q96F44 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM11Q96F44 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM11Q96F44 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM11Q96F44 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRIM11Q96F44 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
TRIM11Q96F44 AC125238.2-201ENST00000430003 1440 ntBASIC7.36□□□□□ -1.23
TRIM11Q96F44 AL031651.1-201ENST00000615357 1438 ntBASIC7.36□□□□□ -1.23
TRIM11Q96F44 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM11Q96F44 MAPK10-287ENST00000641217 3037 ntBASIC7.36□□□□□ -1.23
TRIM11Q96F44 OR4G1P-202ENST00000641173 1788 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms