Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPS3AP14-201ENST00000483907 780 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL635P-201ENST00000492123 296 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 OR7E99P-201ENST00000505750 922 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC026412.2-201ENST00000512270 1075 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU6-1153P-201ENST00000516760 105 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC100823.2-201ENST00000518337 699 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC068587.4-201ENST00000533893 186 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL512310.1-201ENST00000548639 172 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 CHCHD3P2-201ENST00000550751 639 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 NUTF2P2-201ENST00000551207 384 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL359212.1-201ENST00000556608 614 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR4642-201ENST00000583943 82 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AL137190.1-201ENST00000603288 282 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC069304.2-201ENST00000605154 435 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 MIR6723-201ENST00000621981 89 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 AC231657.1-201ENST00000624313 397 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC00561-201ENST00000565815 2738 ntBASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
PCDHGA11Q9Y5H2 IMMTP1-201ENST00000435590 2219 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 MTCO1P14-201ENST00000441695 1559 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 HDAC1P1-201ENST00000455482 1445 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU4-73P-201ENST00000363164 141 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU6-216P-201ENST00000363282 104 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU1-122P-201ENST00000365538 156 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 U8.14-201ENST00000390843 143 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RPS3AP36-201ENST00000398190 775 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 FAT1P1-201ENST00000406588 507 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AL034372.1-201ENST00000407586 754 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SKP129-201ENST00000410288 299 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SKP108-201ENST00000411367 328 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RPS3AP9-201ENST00000417027 792 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 BOLA3P4-201ENST00000418151 400 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC004690.1-201ENST00000418216 328 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 FDPSP1-201ENST00000424976 1071 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 NIPA2P1-201ENST00000426223 976 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 GAPDHP51-201ENST00000426454 1000 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL7P59-201ENST00000447700 943 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL263P-201ENST00000467969 290 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL414P-201ENST00000469545 294 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL233P-201ENST00000469988 277 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL751P-201ENST00000473281 284 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL153P-201ENST00000486501 292 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC114300.1-201ENST00000502347 280 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 KCTD9P5-201ENST00000504141 1170 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 Y_RNA.675-201ENST00000516389 149 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 OR5D2P-201ENST00000524390 911 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 DEFB131D-201ENST00000526803 184 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 CBX3P5-201ENST00000552017 521 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 DPPA3P2-201ENST00000553589 478 ntBASIC7.29□□□□□ -1.24
PCDHGA11Q9Y5H2 AC025678.1-201ENST00000567861 338 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms