Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL121950.1-201ENST00000624993 2077 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RNU1-146P-201ENST00000364015 165 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RPS29P2-201ENST00000479278 136 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RN7SL319P-201ENST00000480656 221 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SCARNA22-201ENST00000503991 125 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC118465.1-201ENST00000513820 1271 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC010547.7-201ENST00000570323 333 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AP005432.2-201ENST00000608162 586 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL159169.3-201ENST00000608871 561 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC140479.6-201ENST00000633535 357 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 IL6STP1-201ENST00000346911 1020 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MIR200C-201ENST00000384980 68 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC016559.2-201ENST00000510759 359 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 HMGB3P7-201ENST00000400214 611 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PPIAP3-201ENST00000450588 505 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC090246.1-201ENST00000616499 426 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC140479.2-201ENST00000421567 3130 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC006058.1-201ENST00000568686 5067 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 RPL23AP26-201ENST00000412728 464 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 CYP4F30P-202ENST00000420048 405 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 AL137845.2-201ENST00000444292 988 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 OR1H1P-201ENST00000448731 937 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 AL162591.2-201ENST00000449634 317 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 HMGN2P25-201ENST00000486956 268 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 RPS27AP13-201ENST00000498403 237 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 SCARNA16.4-201ENST00000516956 187 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 PTTG3P-201ENST00000521862 606 ntBASIC2.1□□□□□ -2.07
MACF1Q9UPN3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC2.1□□□□□ -2.07
MACF1Q9UPN3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms