Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MAPK10-203ENST00000361569 2434 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TP53-213ENST00000510385 2404 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF723-201ENST00000600766 2400 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TP53-223ENST00000618944 2404 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PLCD4-206ENST00000450993 3232 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PROM1-207ENST00000508167 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CDH8-211ENST00000584337 3986 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 IDH1-201ENST00000345146 2382 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MOXD2P-201ENST00000460233 1590 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ABCC11-204ENST00000394748 4576 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC25A17-210ENST00000435456 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZFYVE1-208ENST00000556143 4485 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TDRD1-203ENST00000369282 3705 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PRUNE1-201ENST00000271620 2997 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZSCAN29-201ENST00000396972 2831 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01777-201ENST00000423197 2077 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RBMY1HP-201ENST00000382759 1389 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AP000289.1-201ENST00000421051 1361 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 EPX-201ENST00000225371 2708 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC048338.1-201ENST00000535844 2748 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 OXCT1-201ENST00000196371 3388 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC061975.7-201ENST00000592016 2692 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TUBBP10-201ENST00000427668 1301 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC092279.1-202ENST00000597683 1966 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC012676.5-201ENST00000624337 1955 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MAPK10-325ENST00000641537 2623 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AL391421.1-201ENST00000372387 1922 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 LAMC2-201ENST00000264144 5147 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNA5SP197-201ENST00000363357 119 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNY4P6-201ENST00000363667 96 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 Y_RNA.379-201ENST00000365653 102 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PDZK1IP1-202ENST00000371885 770 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNY1P6-201ENST00000384193 109 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNY1P4-201ENST00000384595 115 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-540P-201ENST00000384622 101 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR626-201ENST00000385032 94 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR181B1-201ENST00000385240 110 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 VENTXP2-201ENST00000399480 481 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AL022722.1-201ENST00000406333 582 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AL030996.1-201ENST00000411430 235 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL10P4-201ENST00000412093 308 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AC013248.2-201ENST00000412454 459 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms