Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR1254-2-201ENST00000579553 63 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 AC125494.2-201ENST00000602431 657 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.88□□□□□ -1.31
ABCA3Q99758 Z98755.1-201ENST00000407015 1384 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 AL137100.1-201ENST00000556703 1620 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 ZNF652P1-201ENST00000442420 1309 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.88□□□□□ -1.31
ABCA3Q99758 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.88□□□□□ -1.31
ABCA3Q99758 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 AC004158.1-201ENST00000564508 4319 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 AC079097.1-201ENST00000512187 1399 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 AL049697.2-201ENST00000403708 294 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 BX510359.2-201ENST00000417920 305 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC234779.1-201ENST00000425910 285 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC124944.2-201ENST00000429866 1242 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AURKAPS2-201ENST00000454983 333 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 GAPDHP62-201ENST00000515313 990 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.87□□□□□ -1.31
ABCA3Q99758 AC138701.1-201ENST00000524329 714 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC009643.1-201ENST00000532030 391 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ABCA3Q99758 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
ABCA3Q99758 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.87□□□□□ -1.31
ABCA3Q99758 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
ABCA3Q99758 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
ABCA3Q99758 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
ABCA3Q99758 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ABCA3Q99758 SNORA57.1-201ENST00000391227 145 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 U3.30-201ENST00000391308 210 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 RN7SKP114-201ENST00000410327 279 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.87□□□□□ -1.31
ABCA3Q99758 IGHV5-78-201ENST00000450948 295 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.87□□□□□ -1.31
ABCA3Q99758 AC093824.1-201ENST00000508796 343 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC012400.1-201ENST00000518452 381 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 NMNAT1P1-201ENST00000554095 876 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AC018558.5-201ENST00000565840 952 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 AL450226.2-201ENST00000622913 439 ntBASIC6.87□□□□□ -1.31
ABCA3Q99758 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ABCA3Q99758 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
ABCA3Q99758 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 ZNF969P-201ENST00000510345 2341 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
ABCA3Q99758 SNORA70F-201ENST00000384142 135 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
ABCA3Q99758 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.86□□□□□ -1.31
ABCA3Q99758 RPL7P41-201ENST00000485823 957 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 SCARNA22-201ENST00000503991 125 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.86□□□□□ -1.31
ABCA3Q99758 AC012339.2-201ENST00000523996 453 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 AL110118.1-201ENST00000553543 400 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.86□□□□□ -1.31
ABCA3Q99758 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.86□□□□□ -1.31
ABCA3Q99758 AC020910.3-201ENST00000603701 874 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 AL445423.1-201ENST00000609941 536 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.86□□□□□ -1.31
ABCA3Q99758 UGT2B24P-201ENST00000514441 1597 ntBASIC6.86□□□□□ -1.31
ABCA3Q99758 LPP-208ENST00000448637 5835 ntTSL 5 BASIC6.86□□□□□ -1.31
ABCA3Q99758 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ABCA3Q99758 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.86□□□□□ -1.31
ABCA3Q99758 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.85□□□□□ -1.31
ABCA3Q99758 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AL390879.1-201ENST00000439143 386 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.85□□□□□ -1.31
ABCA3Q99758 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.85□□□□□ -1.31
ABCA3Q99758 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ABCA3Q99758 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms