Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 SAP18P1-201ENST00000512058 390 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PMS2P3-207ENST00000529061 717 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 WBP11P1-201ENST00000562560 1931 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 U3.30-201ENST00000391308 210 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 GTF2IP5-201ENST00000414608 731 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AL137845.2-201ENST00000444292 988 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC079168.1-201ENST00000458741 345 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 RPL12P25-202ENST00000598100 674 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC005252.1-201ENST00000604518 1063 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 AC006133.1-201ENST00000617106 264 ntBASIC4.16□□□□□ -1.74
VPS13CQ709C8 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS13CQ709C8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS13CQ709C8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC008124.1-201ENST00000609803 9730 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC010478.1-201ENST00000601500 6762 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 SNORD1C-201ENST00000363315 78 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 OR4C10P-201ENST00000434991 931 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 MRPL35P2-201ENST00000448009 511 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 snoU13.1-201ENST00000459157 104 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 IGKV2-23-201ENST00000518729 323 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC130364.2-201ENST00000528639 604 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VPS13CQ709C8 MIR129-1-201ENST00000384972 72 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC073465.2-201ENST00000440938 498 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 REG1CP-206ENST00000447469 496 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 AL358232.1-201ENST00000448030 501 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 RN7SL814P-201ENST00000487715 300 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.15□□□□□ -1.74
VPS13CQ709C8 AC133555.2-201ENST00000550213 292 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 AL139041.1-201ENST00000605480 610 ntBASIC4.15□□□□□ -1.74
VPS13CQ709C8 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 AC005225.5-201ENST00000623547 2225 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 RAD17P1-201ENST00000418130 2042 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 RNA5SP90-201ENST00000364801 99 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 OR6C69P-201ENST00000394268 893 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 AC124944.2-201ENST00000429866 1242 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS13CQ709C8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS13CQ709C8 RPL23AP24-201ENST00000458203 385 ntBASIC4.15□□□□□ -1.75
VPS13CQ709C8 RNU1-88P-201ENST00000459274 128 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms