Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM183DP-201ENST00000421987 399 ntBASIC3.66□□□□□ -1.82
RPL39P62891 SRSF1P1-201ENST00000424058 520 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AL354893.1-201ENST00000433735 348 ntBASIC3.66□□□□□ -1.82
RPL39P62891 CLUHP1-201ENST00000435012 1190 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AL136455.1-201ENST00000441083 1240 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AC005297.1-201ENST00000444765 862 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AL450996.1-201ENST00000445574 1202 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.66□□□□□ -1.82
RPL39P62891 KF459542.1-201ENST00000450908 553 ntBASIC3.66□□□□□ -1.82
RPL39P62891 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 AC079168.1-201ENST00000458741 345 ntBASIC3.66□□□□□ -1.82
RPL39P62891 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.66□□□□□ -1.82
RPL39P62891 RN7SL447P-201ENST00000494711 245 ntBASIC3.66□□□□□ -1.82
RPL39P62891 LSM3P4-201ENST00000502948 309 ntBASIC3.66□□□□□ -1.82
RPL39P62891 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC3.66□□□□□ -1.82
RPL39P62891 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 AP003033.2-201ENST00000528901 805 ntBASIC3.66□□□□□ -1.82
RPL39P62891 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RPL39P62891 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 AC092121.1-201ENST00000569452 202 ntBASIC3.66□□□□□ -1.82
RPL39P62891 LINC00556-201ENST00000569603 412 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AC005341.1-201ENST00000571086 708 ntBASIC3.66□□□□□ -1.82
RPL39P62891 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 AC018695.5-201ENST00000605872 315 ntBASIC3.66□□□□□ -1.82
RPL39P62891 Z95327.3-201ENST00000610385 572 ntBASIC3.66□□□□□ -1.82
RPL39P62891 MTCO1P1-201ENST00000624263 1081 ntBASIC3.66□□□□□ -1.82
RPL39P62891 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.66□□□□□ -1.82
RPL39P62891 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.66□□□□□ -1.82
RPL39P62891 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPL39P62891 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.65□□□□□ -1.82
RPL39P62891 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPL39P62891 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPL39P62891 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPL39P62891 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPL39P62891 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RPL39P62891 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RPL39P62891 RN7SKP28-201ENST00000364770 305 ntBASIC3.65□□□□□ -1.83
RPL39P62891 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 AC093166.2-201ENST00000455969 1017 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AL591473.1-201ENST00000464297 313 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AC098818.1-201ENST00000478593 252 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AC025458.1-201ENST00000506046 166 ntBASIC3.65□□□□□ -1.83
RPL39P62891 HMGB1P44-201ENST00000508597 572 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.65□□□□□ -1.83
RPL39P62891 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AC027369.2-201ENST00000528030 440 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.65□□□□□ -1.83
RPL39P62891 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.65□□□□□ -1.83
RPL39P62891 AL845552.1-201ENST00000556820 323 ntBASIC3.65□□□□□ -1.83
RPL39P62891 RBM22P12-201ENST00000567098 1255 ntBASIC3.65□□□□□ -1.83
RPL39P62891 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 MIR3154-201ENST00000577829 84 ntBASIC3.65□□□□□ -1.83
RPL39P62891 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 AC005252.1-201ENST00000604518 1063 ntBASIC3.65□□□□□ -1.83
RPL39P62891 BNIP3P35-201ENST00000604530 490 ntBASIC3.65□□□□□ -1.83
RPL39P62891 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.65□□□□□ -1.83
RPL39P62891 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 AC108359.1-201ENST00000616451 1211 ntBASIC3.65□□□□□ -1.83
RPL39P62891 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 YES1P1-201ENST00000418510 1628 ntBASIC3.65□□□□□ -1.83
RPL39P62891 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 AC002090.1-201ENST00000625000 2138 ntBASIC3.65□□□□□ -1.83
RPL39P62891 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.65□□□□□ -1.83
RPL39P62891 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RPL39P62891 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPL39P62891 NEAT1-202ENST00000501122 22743 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms