Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SLC28A1O00337 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC003985.2-201ENST00000562268 1669 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC28A1O00337 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC28A1O00337 RN7SKP6-201ENST00000364795 319 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 GAPDHP42-201ENST00000406848 981 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC28A1O00337 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC28A1O00337 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC017019.1-201ENST00000426129 261 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC28A1O00337 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AC005297.1-201ENST00000444765 862 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AL450996.1-201ENST00000445574 1202 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AP002884.1-201ENST00000479691 655 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 SCARNA20.4-201ENST00000516969 131 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC28A1O00337 CDC42P3-201ENST00000518493 633 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 TRIM77BP-201ENST00000524985 1119 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC28A1O00337 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AP002884.5-201ENST00000595053 1132 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC108738.1-201ENST00000603703 237 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 MIR6889-201ENST00000613185 59 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 FO681491.1-202ENST00000623392 737 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AC138965.3-201ENST00000623875 498 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 AC073593.1-201ENST00000624500 411 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 IFIT1P1-201ENST00000400497 1449 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC28A1O00337 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 AL078621.3-201ENST00000623707 2042 ntBASIC5.28□□□□□ -1.56
SLC28A1O00337 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC28A1O00337 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC28A1O00337 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC28A1O00337 RNA5SP394-201ENST00000364216 119 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 RNA5SP433-201ENST00000364491 114 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 OR13C3-201ENST00000374781 1108 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 HMGB1P20-201ENST00000402555 677 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 HYALP1-201ENST00000417674 1279 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC066692.1-201ENST00000421721 457 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC28A1O00337 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC28A1O00337 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 LRRC37A14P-201ENST00000452297 462 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AP000547.1-201ENST00000454360 617 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AC005165.2-201ENST00000466070 380 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 IGBP1P4-201ENST00000503202 879 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 HMGN1P9-201ENST00000515212 298 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 RNA5SP271-201ENST00000516700 88 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AC020937.1-201ENST00000519677 1013 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 BCAS2P1-201ENST00000528022 632 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AP005403.1-201ENST00000579720 229 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms