Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC117529.2-201ENST00000512159 2068 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC02128-205ENST00000641755 1334 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SPATA31D5P-201ENST00000376459 4784 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 AC007126.1-201ENST00000508202 4781 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 OR7E122P-202ENST00000641144 6171 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 SALL1P1-201ENST00000438101 3837 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 EEF1A1P5-201ENST00000436459 1389 ntBASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 NHS-204ENST00000615422 8860 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
KRTAP4-3Q9BYR4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SPATA31C2-201ENST00000324915 3777 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 ACTR3BP5-201ENST00000448440 1479 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AC006116.1-201ENST00000587908 2171 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 RBMX2P2-201ENST00000257020 946 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL23AP57-201ENST00000332361 466 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP44-201ENST00000363602 316 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 RNA5SP267-201ENST00000364893 126 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.472-201ENST00000384322 102 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.527-201ENST00000384573 102 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 MIR138-2-201ENST00000384916 84 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 RAB5CP1-201ENST00000395972 580 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 HMGB3P7-201ENST00000400214 611 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AL353151.1-201ENST00000402406 604 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AL589655.1-201ENST00000405398 482 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 GAS8-AS1-201ENST00000408886 435 ntBASIC2.59□□□□□ -1.99
KRTAP4-3Q9BYR4 AC211486.3-201ENST00000412694 621 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms