Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC245088.2-201ENST00000634605 394 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 KRTAP9-1-204ENST00000635603 369 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC083841.4-201ENST00000637396 352 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 COX15-201ENST00000016171 2356 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RBM23-202ENST00000346528 2361 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 HACL1-201ENST00000321169 2266 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 HACL1-213ENST00000628377 2214 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TRIM26-266ENST00000437089 3250 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC016168.3-201ENST00000625040 3246 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AKAP13-221ENST00000560579 4290 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC027279.1-201ENST00000568885 4284 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AP000892.3-201ENST00000624094 5326 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RORC-202ENST00000356728 3050 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL133367.1-201ENST00000568177 4063 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PSTPIP2-201ENST00000409746 3000 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RAD17-204ENST00000354312 2943 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 POMGNT1-202ENST00000371992 2934 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AC004147.2-201ENST00000583224 3753 ntTSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC02211-203ENST00000642022 2816 ntBASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AC025040.2-201ENST00000558657 1852 ntBASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 MLC1-202ENST00000395876 3601 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 WDR91-202ENST00000423565 4500 ntTSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 PLA2G2D-201ENST00000375105 2672 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 PEX12-204ENST00000613219 2682 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 CREB3L4-205ENST00000368607 1752 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 VRK3-223ENST00000601341 1777 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AC083805.1-201ENST00000499481 3507 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 AP003784.1-201ENST00000622964 1749 ntBASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF423-202ENST00000535559 4201 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 AL390728.2-201ENST00000400933 1670 ntBASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 MROH8-203ENST00000400441 3345 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CDH26-203ENST00000350849 2494 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 CASP7-211ENST00000621345 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms