Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RNU1-35P-201ENST00000362782 153 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 Y_RNA.202-201ENST00000364083 110 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC093719.1-202ENST00000392735 373 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 GSTA9P-201ENST00000406231 611 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RN7SKP85-201ENST00000411349 318 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 PIGPP2-201ENST00000411569 458 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RPL17P12-201ENST00000413391 526 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL157884.1-201ENST00000424561 454 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RPS27P18-201ENST00000431701 247 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL627308.1-201ENST00000435693 821 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 EMC3-AS1-205ENST00000438698 534 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 SDCBPP1-201ENST00000440192 890 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL163193.1-201ENST00000444895 788 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 MTCO3P11-201ENST00000455103 774 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ACTR3P3-201ENST00000480448 893 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RN7SL332P-201ENST00000482163 254 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RPS15AP36-201ENST00000492022 382 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC021733.2-201ENST00000518830 497 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC005519.1-201ENST00000554490 601 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL512360.1-201ENST00000555346 234 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RN7SL404P-201ENST00000582421 281 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC007687.1-201ENST00000602704 304 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC006504.8-201ENST00000621046 635 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AF001550.2-201ENST00000636643 217 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC004014.2-201ENST00000623718 5122 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL512504.2-201ENST00000445455 1909 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL365475.1-201ENST00000565135 1949 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AL031651.1-201ENST00000615357 1438 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 AL049833.3-201ENST00000623920 3738 ntBASIC7.34□□□□□ -1.24
COL25A1Q9BXS0 ZNF37BP-203ENST00000452306 1352 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RNU5F-7P-201ENST00000363696 115 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 Y_RNA.166-201ENST00000363730 102 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RNU6-353P-201ENST00000364266 108 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 Y_RNA.302-201ENST00000364997 102 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 RNA5SP485-201ENST00000365053 119 ntBASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL25A1Q9BXS0 SNORA40.3-201ENST00000390964 122 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms