Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 MRPS35P3-201ENST00000603189 709 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL352984.2-202ENST00000613699 155 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AP002782.1-201ENST00000623107 614 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC022400.9-201ENST00000623633 273 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC098679.5-201ENST00000624394 571 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC084035.1-201ENST00000634543 607 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RBMY1HP-201ENST00000382759 1389 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AL354854.1-201ENST00000455940 1363 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 AC130360.2-201ENST00000533477 1556 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 DNM1P47-203ENST00000571780 12667 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01616-201ENST00000561816 2280 ntBASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP1Q96SZ6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL591135.1-201ENST00000401578 5914 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008627.1-201ENST00000517511 1704 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005261.4-201ENST00000600047 1385 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU6-906P-201ENST00000384700 70 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR130B-202ENST00000385018 82 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AP003170.5-201ENST00000397185 335 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 MTND4LP20-201ENST00000402379 270 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR1282-201ENST00000408865 101 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 HMGA1P8-201ENST00000414130 321 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL23AP18-201ENST00000416139 468 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RPL22P18-201ENST00000417197 377 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RPS15AP30-201ENST00000420976 390 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 USP9YP11-201ENST00000427537 717 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 MRPS33P4-201ENST00000434892 317 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 H3F3BP1-201ENST00000440551 403 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC079922.1-201ENST00000443291 359 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005077.1-201ENST00000449226 375 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RPS27AP3-201ENST00000453803 454 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC094085.1-201ENST00000468914 584 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 EIF1P7-201ENST00000487533 337 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC109927.2-201ENST00000506416 303 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 SCARNA18.1-201ENST00000516330 83 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC105185.1-201ENST00000518705 535 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AP001207.2-201ENST00000519490 539 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 DUXAP6-201ENST00000553858 601 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL391156.1-201ENST00000554965 554 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 OR4H6P-201ENST00000563771 921 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC109446.2-201ENST00000567872 497 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 NBR2-204ENST00000587322 63 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL583856.2-201ENST00000606298 543 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC245297.2-201ENST00000610119 565 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RN7SL261P-201ENST00000613441 282 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC096861.1-201ENST00000616652 240 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC096708.4-201ENST00000620563 552 ntBASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms