Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 NEK2P2-201ENST00000438441 1338 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 RPL23P2-201ENST00000320371 421 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 RNA5SP319-201ENST00000362768 119 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SNORA43.1-201ENST00000364863 140 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL035419.1-201ENST00000397037 564 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL109941.1-201ENST00000401925 229 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MRPL53P1-201ENST00000414323 319 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MTCYBP15-201ENST00000433123 1127 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MRPS21P3-201ENST00000436696 262 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC245517.2-201ENST00000442890 346 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 RN7SL561P-201ENST00000488553 281 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC104115.2-201ENST00000523026 687 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SOX5P1-201ENST00000524155 1127 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC092375.1-201ENST00000550410 637 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 MIR4480-201ENST00000582492 71 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC006116.5-201ENST00000591936 559 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC097655.1-201ENST00000635075 318 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AL662795.2-201ENST00000624252 3706 ntBASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
SMC1BQ8NDV3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 ZNF402P-201ENST00000404435 3100 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 RNA5SP305-201ENST00000362665 119 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 CYCSP12-201ENST00000437729 300 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC099521.1-201ENST00000482557 334 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 NPM1P29-201ENST00000483112 803 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC098862.1-201ENST00000504991 413 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 PGAM1P13-201ENST00000507497 754 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC067904.2-201ENST00000517322 1283 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 IGHV3-57-201ENST00000520143 280 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 NOP56P3-201ENST00000549457 385 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC079075.1-201ENST00000559543 878 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC009120.3-201ENST00000563335 499 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 DPPA2P4-201ENST00000563717 878 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC009712.1-201ENST00000564938 316 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 AC091057.3-201ENST00000602684 733 ntBASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SMC1BQ8NDV3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms