Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 Y_RNA.132-201ENST00000363421 102 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RNA5SP88-201ENST00000365560 109 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 HMGB3P18-201ENST00000406327 590 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RNA5SP231-201ENST00000410496 138 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RNU4-55P-201ENST00000410731 137 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AL355862.1-201ENST00000412705 353 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AL161631.1-201ENST00000417933 486 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 GRPEL2P2-201ENST00000421856 670 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 GAPDHP55-201ENST00000423136 803 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 GAPDHP51-201ENST00000426454 1000 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 TAAR7P-201ENST00000436141 242 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 UBE2FP3-201ENST00000436366 524 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 LDHAP2-201ENST00000437325 985 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 MTND3P2-201ENST00000438452 342 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RPL31P15-201ENST00000449770 338 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC008496.1-201ENST00000509131 295 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RNU6-1225P-201ENST00000516336 65 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 OR6M3P-201ENST00000531567 700 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC018523.1-201ENST00000534211 512 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 COX6CP11-201ENST00000555293 229 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AL359212.1-201ENST00000556608 614 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RN7SL835P-201ENST00000579920 262 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 MIR4666A-201ENST00000580160 79 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC023513.1-201ENST00000604396 691 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC008385.1-201ENST00000604421 355 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 FAM27E3-202ENST00000614611 340 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC015722.2-201ENST00000622210 551 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AC012078.1-201ENST00000405035 1646 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 AP003471.1-202ENST00000319051 1988 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 ZNF840P-201ENST00000504759 1996 ntBASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.44□□□□□ -1.22
LYSMD3Q7Z3D4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AL590065.1-201ENST00000603371 4774 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC009237.3-203ENST00000442128 3551 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AL137918.1-201ENST00000624542 1922 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 OR11H13P-201ENST00000359695 979 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 SNORA73B-201ENST00000363217 204 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 RNU6-483P-201ENST00000384088 108 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 SNORA68-201ENST00000384437 133 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AMD1P2-201ENST00000412936 992 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AL773545.3-201ENST00000414297 706 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 FCF1P2-201ENST00000415284 583 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC002069.1-201ENST00000429649 1159 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 Z83313.1-201ENST00000433780 718 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TAAR3P-201ENST00000466706 1078 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 ST13P14-201ENST00000474095 734 ntBASIC7.43□□□□□ -1.22
LYSMD3Q7Z3D4 TAAR3P-202ENST00000481759 1025 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms