Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CENPAP49450 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CENPAP49450 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.43□□□□□ -1.54
CENPAP49450 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.43□□□□□ -1.54
CENPAP49450 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CENPAP49450 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CENPAP49450 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 AL158152.1-201ENST00000602652 1435 ntBASIC5.42□□□□□ -1.54
CENPAP49450 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.42□□□□□ -1.54
CENPAP49450 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 OR10R3P-201ENST00000361688 942 ntBASIC5.42□□□□□ -1.54
CENPAP49450 MIR16-2-201ENST00000362117 81 ntBASIC5.42□□□□□ -1.54
CENPAP49450 RNU105B-201ENST00000364478 208 ntBASIC5.42□□□□□ -1.54
CENPAP49450 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 RN7SKP17-201ENST00000411242 351 ntBASIC5.42□□□□□ -1.54
CENPAP49450 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC094019.1-201ENST00000434678 472 ntBASIC5.42□□□□□ -1.54
CENPAP49450 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC013403.1-201ENST00000436954 263 ntBASIC5.42□□□□□ -1.54
CENPAP49450 Z84478.1-201ENST00000438230 1219 ntBASIC5.42□□□□□ -1.54
CENPAP49450 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 CLIC4P1-201ENST00000453177 535 ntBASIC5.42□□□□□ -1.54
CENPAP49450 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 ACA64.4-201ENST00000459070 127 ntBASIC5.42□□□□□ -1.54
CENPAP49450 snoU13.29-201ENST00000459370 104 ntBASIC5.42□□□□□ -1.54
CENPAP49450 AC018635.1-201ENST00000468292 1030 ntBASIC5.42□□□□□ -1.54
CENPAP49450 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 RPL34P33-201ENST00000486062 334 ntBASIC5.42□□□□□ -1.54
CENPAP49450 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AC244502.2-201ENST00000543361 851 ntBASIC5.42□□□□□ -1.54
CENPAP49450 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC005632.2-201ENST00000564271 828 ntBASIC5.42□□□□□ -1.54
CENPAP49450 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 AC011891.2-201ENST00000604949 397 ntBASIC5.42□□□□□ -1.54
CENPAP49450 AC093388.1-201ENST00000609166 430 ntBASIC5.42□□□□□ -1.54
CENPAP49450 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 uc_338.26-201ENST00000612659 160 ntBASIC5.42□□□□□ -1.54
CENPAP49450 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CENPAP49450 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.42□□□□□ -1.54
CENPAP49450 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.42□□□□□ -1.54
CENPAP49450 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.42□□□□□ -1.54
CENPAP49450 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CENPAP49450 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CENPAP49450 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
CENPAP49450 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CENPAP49450 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CENPAP49450 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.41□□□□□ -1.54
CENPAP49450 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CENPAP49450 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CENPAP49450 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.41□□□□□ -1.54
CENPAP49450 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CENPAP49450 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CENPAP49450 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CENPAP49450 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CENPAP49450 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CENPAP49450 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.41□□□□□ -1.54
CENPAP49450 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.41□□□□□ -1.54
CENPAP49450 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.41□□□□□ -1.54
CENPAP49450 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms