Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC015914.2-201ENST00000618167 288 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 BX005214.3-202ENST00000619809 325 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AP001642.1-201ENST00000624727 2117 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.29□□□□□ -1.72
SSSCA1O60232 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.29□□□□□ -1.72
SSSCA1O60232 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 IFIT1P1-201ENST00000400497 1449 ntBASIC4.29□□□□□ -1.72
SSSCA1O60232 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSSCA1O60232 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
SSSCA1O60232 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AC093849.1-201ENST00000563631 2209 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 RNU1-65P-201ENST00000363919 148 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AC013429.2-201ENST00000418798 781 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 FAM183DP-201ENST00000421987 399 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 RPL34P6-201ENST00000432390 345 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.28□□□□□ -1.72
SSSCA1O60232 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.28□□□□□ -1.72
SSSCA1O60232 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 NOP56P2-201ENST00000447491 769 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AC068228.1-201ENST00000461723 211 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 RPS23P6-201ENST00000466136 431 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AC018639.1-201ENST00000492994 442 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AC090638.1-201ENST00000498296 909 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AC105031.1-201ENST00000518550 476 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AP001000.1-201ENST00000526843 742 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AC015802.2-201ENST00000589690 189 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 PPATP2-201ENST00000605635 508 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 RN7SL544P-201ENST00000617232 284 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 RN7SL763P-201ENST00000620922 284 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AP001962.1-201ENST00000624114 559 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.28□□□□□ -1.72
SSSCA1O60232 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.28□□□□□ -1.72
SSSCA1O60232 AP005432.1-201ENST00000580891 3485 ntBASIC4.28□□□□□ -1.72
SSSCA1O60232 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.28□□□□□ -1.72
SSSCA1O60232 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSSCA1O60232 SRRM1P3-201ENST00000426911 2678 ntBASIC4.28□□□□□ -1.73
SSSCA1O60232 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.73
SSSCA1O60232 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
SSSCA1O60232 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SSSCA1O60232 OR7E25P-201ENST00000344844 931 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 RNA5SP131-201ENST00000365452 119 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 MIR551B-201ENST00000384984 96 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 NACAP7-201ENST00000407371 609 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
SSSCA1O60232 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 RPL35AP21-201ENST00000437667 333 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 MRPL35P2-201ENST00000448009 511 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AC108161.1-201ENST00000461060 402 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.27□□□□□ -1.73
SSSCA1O60232 SNRPCP11-201ENST00000492453 205 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 Y_RNA.667-201ENST00000516212 107 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 RNA5SP438-201ENST00000516561 112 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 SCARNA16.4-201ENST00000516956 187 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.27□□□□□ -1.73
SSSCA1O60232 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 DPPA2P4-201ENST00000563717 878 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 MRPS21P7-201ENST00000566937 238 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 RN7SL708P-201ENST00000580952 299 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AC006272.2-201ENST00000594725 163 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 AC099654.11-201ENST00000638857 294 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 OR8G3P-202ENST00000641572 1255 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms