Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC188H7C350 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC188H7C350 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC188H7C350 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL442128.2-201ENST00000620246 1824 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 RPL12P9-201ENST00000412942 488 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 Z82198.3-201ENST00000421145 199 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC007064.3-201ENST00000422608 359 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 CLNS1AP1-201ENST00000435954 682 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL450023.1-201ENST00000450868 751 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 KF459542.1-201ENST00000450908 553 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC239798.3-201ENST00000454459 408 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AL356390.1-201ENST00000455684 397 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC022336.1-201ENST00000475510 337 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC087672.1-201ENST00000479876 766 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC098583.1-201ENST00000480875 255 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 RN7SL649P-201ENST00000496974 275 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AP000648.1-201ENST00000529682 397 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC188H7C350 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 OR1E3-201ENST00000575608 948 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AL031601.1-201ENST00000605702 394 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 MIR6721-201ENST00000617181 87 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 SAMMSON-227ENST00000642114 1199 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC188H7C350 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC188H7C350 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
CCDC188H7C350 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC188H7C350 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC188H7C350 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 RNU1-19P-201ENST00000363306 165 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 OR13C3-201ENST00000374781 1108 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 DHFRP5-201ENST00000406944 564 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 RNU6-564P-201ENST00000410983 104 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 BX119321.1-201ENST00000428912 797 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AC090018.1-201ENST00000434369 367 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 SNRPFP2-201ENST00000440710 251 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC188H7C350 RPL29P23-201ENST00000486188 442 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 NENFP3-201ENST00000503735 313 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 RNA5SP340-201ENST00000517132 107 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 SEC11B-201ENST00000518383 499 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AC022360.1-201ENST00000521058 340 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AC100784.1-201ENST00000522790 310 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 LSM3P2-201ENST00000551246 273 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AC006349.1-201ENST00000555526 235 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms