Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL080312.1-201ENST00000256654 824 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC017079.1-201ENST00000333650 415 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 RNU6-697P-201ENST00000363348 107 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 SNORD56.6-201ENST00000384569 71 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 RAB5CP1-201ENST00000395972 580 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL009179.1-201ENST00000406085 265 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC245291.3-201ENST00000443400 292 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC073909.1-201ENST00000447112 999 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL596266.1-201ENST00000448132 400 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 PPIAP7-201ENST00000454070 489 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 OR7L1P-201ENST00000456181 380 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC016559.2-201ENST00000510759 359 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC091912.1-201ENST00000511351 248 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AP000620.1-201ENST00000527147 504 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC096996.1-201ENST00000563813 325 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL512430.4-201ENST00000603085 613 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC073333.2-201ENST00000603589 769 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 OR7M1P-201ENST00000608946 533 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AL158062.1-201ENST00000619632 745 ntBASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
KCNIP3Q9Y2W7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 MT-RNR2-201ENST00000387347 1559 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC073136.1-201ENST00000449426 2884 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 OR7E25P-201ENST00000344844 931 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 RPS6P2-201ENST00000454208 705 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AZGP1P2-201ENST00000454506 345 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 MTND6P32-201ENST00000457611 483 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 H3F3AP5-201ENST00000475267 429 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 MIR4311-201ENST00000580794 100 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC005244.1-201ENST00000582566 339 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AP000919.1-201ENST00000582850 985 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AL591222.2-201ENST00000604443 754 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC074140.1-201ENST00000621617 208 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC089999.3-201ENST00000622440 577 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC243960.7-201ENST00000623532 707 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms