Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 RPL35P8-201ENST00000433284 337 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 RPL7P54-201ENST00000438336 674 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 OR7A15P-201ENST00000449848 1009 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 SLC31A1P1-201ENST00000451221 567 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC099563.1-201ENST00000456086 418 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC021660.1-201ENST00000465006 554 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 MTND6P19-201ENST00000519399 524 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 SNX18P27-201ENST00000523611 779 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AP003084.1-201ENST00000524828 742 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AP005597.4-201ENST00000526762 229 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AP001804.2-201ENST00000533932 910 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 RN7SL835P-201ENST00000579920 262 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 MIR5682-201ENST00000584864 76 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AC036176.3-201ENST00000602456 418 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AC006006.1-201ENST00000603082 144 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 MIR7150-201ENST00000614393 94 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AC090971.5-201ENST00000621102 293 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 TPTEP1-208ENST00000636884 213 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.93□□□□□ -1.14
HLA-CQ95604 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AL390195.2-201ENST00000564771 2023 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AC074043.1-201ENST00000483126 1776 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.92□□□□□ -1.14
HLA-CQ95604 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.92□□□□□ -1.14
HLA-CQ95604 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
HLA-CQ95604 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-CQ95604 AC092634.1-201ENST00000366505 199 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
HLA-CQ95604 RNU6-98P-201ENST00000384173 107 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 MT-TP-201ENST00000387461 68 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
HLA-CQ95604 RNU6-244P-201ENST00000391028 104 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 BX679664.2-201ENST00000439282 283 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 CBX1P1-201ENST00000440184 427 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 RPSAP40-201ENST00000442343 891 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 RPL7P12-201ENST00000446719 750 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AC083798.1-201ENST00000472671 131 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 RPL17P2-201ENST00000491913 451 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 RN7SL143P-201ENST00000496780 297 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 OR7E163P-201ENST00000505943 894 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 SCARNA18.2-201ENST00000516882 84 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-CQ95604 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.92□□□□□ -1.14
HLA-CQ95604 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 AL121594.2-201ENST00000541658 472 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 NXPE2P1-201ENST00000543705 726 ntBASIC7.92□□□□□ -1.14
HLA-CQ95604 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-CQ95604 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms