Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS4Q8IUM7 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
NPAS4Q8IUM7 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS4Q8IUM7 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
NPAS4Q8IUM7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 IFIT1P1-201ENST00000400497 1449 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RNA5SP485-201ENST00000365053 119 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RNU6-225P-201ENST00000384613 103 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RNU6-253P-201ENST00000384730 105 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 SNORD65.1-201ENST00000390889 71 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RNA5SP80-201ENST00000410475 111 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RAD23BP2-201ENST00000416003 1207 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AL034418.1-201ENST00000448675 860 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 FAR2P1-206ENST00000449736 709 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 OR52J1P-201ENST00000450596 932 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RFC5P1-201ENST00000454419 874 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC021006.1-201ENST00000489849 553 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RN7SL362P-201ENST00000494228 267 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 DSTNP2-201ENST00000504533 515 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 OR8A2P-201ENST00000528631 952 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 OR4A21P-201ENST00000532759 944 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 MIR4433B-201ENST00000581329 102 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AF131215.7-201ENST00000602443 707 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC067959.1-201ENST00000604334 379 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AP003973.1-201ENST00000604639 691 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC004948.1-201ENST00000609858 672 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC116165.2-201ENST00000616705 206 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC007494.3-201ENST00000624660 743 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AP003400.5-201ENST00000624827 617 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AL355480.1-201ENST00000629041 99 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AP003486.1-201ENST00000525716 3994 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC018992.1-201ENST00000523778 2149 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 AC020658.2-201ENST00000559030 4020 ntBASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS4Q8IUM7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 STAG3L4-201ENST00000352103 530 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 RN7SKP237-201ENST00000364663 301 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 U3.52-201ENST00000384034 216 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 SNORA51.12-201ENST00000384448 134 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 RN7SKP232-201ENST00000410170 290 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 RNA5SP115-201ENST00000411160 107 ntBASIC7.29□□□□□ -1.24
NPAS4Q8IUM7 TPT1P2-201ENST00000413105 503 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms