Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 AC007114.2-201ENST00000576014 4281 ntBASIC5.63□□□□□ -1.51
HTTP42858 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.63□□□□□ -1.51
HTTP42858 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 RNA5SP90-201ENST00000364801 99 ntBASIC5.63□□□□□ -1.51
HTTP42858 AL353626.3-201ENST00000413399 657 ntBASIC5.63□□□□□ -1.51
HTTP42858 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.63□□□□□ -1.51
HTTP42858 PHBP16-201ENST00000446318 950 ntBASIC5.63□□□□□ -1.51
HTTP42858 IGHV5-78-201ENST00000450948 295 ntBASIC5.63□□□□□ -1.51
HTTP42858 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.63□□□□□ -1.51
HTTP42858 RPL23AP24-201ENST00000458203 385 ntBASIC5.63□□□□□ -1.51
HTTP42858 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.63□□□□□ -1.51
HTTP42858 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 AP000547.3-204ENST00000588548 2523 ntBASIC5.63□□□□□ -1.51
HTTP42858 AC068446.1-201ENST00000556425 1549 ntBASIC5.63□□□□□ -1.51
HTTP42858 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HTTP42858 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.63□□□□□ -1.51
HTTP42858 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 DSTNP2-201ENST00000504533 515 ntBASIC5.63□□□□□ -1.51
HTTP42858 MED28P5-201ENST00000528254 438 ntBASIC5.63□□□□□ -1.51
HTTP42858 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 AC093827.1-201ENST00000480094 861 ntBASIC5.62□□□□□ -1.51
HTTP42858 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.62□□□□□ -1.51
HTTP42858 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.62□□□□□ -1.51
HTTP42858 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HTTP42858 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HTTP42858 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 SACS-202ENST00000402364 15134 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.62□□□□□ -1.51
HTTP42858 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC5.62□□□□□ -1.51
HTTP42858 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 RAD17P1-201ENST00000418130 2042 ntBASIC5.62□□□□□ -1.51
HTTP42858 AP001324.1-201ENST00000428553 399 ntBASIC5.62□□□□□ -1.51
HTTP42858 NOP56P2-201ENST00000447491 769 ntBASIC5.62□□□□□ -1.51
HTTP42858 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HTTP42858 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 NDUFB4P12-201ENST00000513465 390 ntBASIC5.62□□□□□ -1.51
HTTP42858 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.62□□□□□ -1.51
HTTP42858 NMNAT1P1-201ENST00000554095 876 ntBASIC5.62□□□□□ -1.51
HTTP42858 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC5.62□□□□□ -1.51
HTTP42858 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 AC067852.5-201ENST00000589299 310 ntBASIC5.62□□□□□ -1.51
HTTP42858 AL133481.2-203ENST00000607558 139 ntBASIC5.62□□□□□ -1.51
HTTP42858 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HTTP42858 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HTTP42858 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 OR4K17-201ENST00000315543 1032 ntBASIC5.61□□□□□ -1.51
HTTP42858 RNA5SP397-201ENST00000391323 118 ntBASIC5.61□□□□□ -1.51
HTTP42858 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 RPL6P5-201ENST00000445678 828 ntBASIC5.61□□□□□ -1.51
HTTP42858 MTND2P28-201ENST00000457540 1044 ntBASIC5.61□□□□□ -1.51
HTTP42858 SLC25A51P1-201ENST00000468432 871 ntBASIC5.61□□□□□ -1.51
HTTP42858 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.61□□□□□ -1.51
HTTP42858 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.61□□□□□ -1.51
HTTP42858 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.61□□□□□ -1.51
HTTP42858 EIF1P5-201ENST00000585002 234 ntBASIC5.61□□□□□ -1.51
HTTP42858 AC005191.1-201ENST00000603950 358 ntBASIC5.61□□□□□ -1.51
HTTP42858 AC034229.5-201ENST00000624258 185 ntBASIC5.61□□□□□ -1.51
HTTP42858 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 AC018765.1-201ENST00000623357 3446 ntBASIC5.61□□□□□ -1.51
HTTP42858 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
HTTP42858 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms