Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC004890.3-201ENST00000605566 1095 ntBASIC2.29□□□□□ -2.04
USH2AO75445 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 VN1R34P-201ENST00000447387 883 ntBASIC2.29□□□□□ -2.04
USH2AO75445 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 GAPDHP56-201ENST00000506031 988 ntBASIC2.29□□□□□ -2.04
USH2AO75445 AC021106.1-201ENST00000509020 1058 ntBASIC2.29□□□□□ -2.04
USH2AO75445 GTF2F2P1-201ENST00000511083 675 ntBASIC2.29□□□□□ -2.04
USH2AO75445 AC010476.1-201ENST00000519111 851 ntBASIC2.29□□□□□ -2.04
USH2AO75445 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 AC008814.1-201ENST00000603797 406 ntBASIC2.29□□□□□ -2.04
USH2AO75445 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 SMG1P7-201ENST00000565246 2704 ntBASIC2.29□□□□□ -2.04
USH2AO75445 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 AC018628.1-201ENST00000624147 3819 ntBASIC2.29□□□□□ -2.04
USH2AO75445 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AC058823.1-201ENST00000485315 474 ntBASIC2.29□□□□□ -2.04
USH2AO75445 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 AC007179.3-201ENST00000604976 235 ntBASIC2.29□□□□□ -2.04
USH2AO75445 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 RAD17P1-201ENST00000418130 2042 ntBASIC2.29□□□□□ -2.04
USH2AO75445 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 RN7SKP202-201ENST00000410439 330 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 AC007161.1-204ENST00000423039 460 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.28□□□□□ -2.04
USH2AO75445 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 AL591034.3-201ENST00000605511 685 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AC114781.5-201ENST00000615297 108 ntBASIC2.28□□□□□ -2.04
USH2AO75445 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 MARK2P15-201ENST00000432204 2186 ntBASIC2.28□□□□□ -2.04
USH2AO75445 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
USH2AO75445 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH2AO75445 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 RPL7AP25-201ENST00000423357 805 ntBASIC2.28□□□□□ -2.04
USH2AO75445 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.04
USH2AO75445 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC2.28□□□□□ -2.04
USH2AO75445 RPL21P126-201ENST00000470049 478 ntBASIC2.28□□□□□ -2.04
USH2AO75445 UBE2DNL-203ENST00000474922 222 ntBASIC2.28□□□□□ -2.04
USH2AO75445 RPS7P6-201ENST00000485777 579 ntBASIC2.28□□□□□ -2.04
USH2AO75445 SCARNA22-201ENST00000503991 125 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AC091912.1-201ENST00000511351 248 ntBASIC2.28□□□□□ -2.04
USH2AO75445 SNORA31.9-201ENST00000516429 84 ntBASIC2.28□□□□□ -2.04
USH2AO75445 OR5D2P-201ENST00000524390 911 ntBASIC2.28□□□□□ -2.04
USH2AO75445 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.28□□□□□ -2.04
USH2AO75445 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.28□□□□□ -2.04
USH2AO75445 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms