Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 MIR6861-201ENST00000618657 64 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 AC136475.10-201ENST00000620253 385 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 AC211486.4-201ENST00000621495 113 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 AC116563.2-201ENST00000624751 535 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 AL390195.2-201ENST00000564771 2023 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.79□□□□□ -1
HPS5Q9UPZ3 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.79□□□□□ -1
HPS5Q9UPZ3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 AC015871.4-201ENST00000624650 2260 ntBASIC8.79□□□□□ -1
HPS5Q9UPZ3 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HPS5Q9UPZ3 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.79□□□□□ -1
HPS5Q9UPZ3 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HPS5Q9UPZ3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 ICE2P1-201ENST00000512800 1849 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 Y_RNA.86-201ENST00000363020 111 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 SNORA4.1-201ENST00000364263 144 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RN7SKP171-201ENST00000364417 303 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 Y_RNA.302-201ENST00000364997 102 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RNU4-70P-201ENST00000384579 139 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 MIR575-201ENST00000385013 94 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL033519.1-201ENST00000407266 307 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RN7SKP279-201ENST00000411383 298 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RPL17P12-201ENST00000413391 526 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RPL35AP24-201ENST00000413846 330 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC096644.3-201ENST00000416788 338 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 RPL29P7-201ENST00000440227 457 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL022237.1-201ENST00000446663 358 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL121877.1-201ENST00000453704 622 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RNU7-140P-201ENST00000459546 60 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 RN7SL751P-201ENST00000473281 284 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 RNU6-430P-201ENST00000517078 107 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL359212.1-201ENST00000556608 614 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 MEMO1P5-201ENST00000604810 406 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AP003400.3-201ENST00000624904 346 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL031595.3-201ENST00000624919 14262 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL035555.1-201ENST00000404462 1790 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.78□□□□□ -1
HPS5Q9UPZ3 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 AC091046.3-201ENST00000631455 1574 ntBASIC8.78□□□□□ -1
HPS5Q9UPZ3 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.78□□□□□ -1
HPS5Q9UPZ3 TRIM51HP-202ENST00000530412 1823 ntBASIC8.77□□□□□ -1
HPS5Q9UPZ3 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HPS5Q9UPZ3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HPS5Q9UPZ3 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HPS5Q9UPZ3 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 SAMMSON-222ENST00000641901 2727 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 OR8B9P-202ENST00000642028 5216 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 SNORA73B-201ENST00000363217 204 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 RN7SKP15-201ENST00000364742 309 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 PIGPP2-201ENST00000411569 458 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 RN7SL502P-201ENST00000481857 290 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 RPL15P21-201ENST00000495592 567 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 NPY6R-201ENST00000503807 1112 ntBASIC8.77□□□□□ -1.01
HPS5Q9UPZ3 AC008496.1-201ENST00000509131 295 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms