Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 ALAS1-205ENST00000484952 2356 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 RNA5SP391-201ENST00000363456 119 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 U3.15-201ENST00000365398 212 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 MIR624-201ENST00000385217 97 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 RNA5SP244-201ENST00000390936 112 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 FEN1P1-201ENST00000401028 1145 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC007064.1-201ENST00000412238 351 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC011747.2-201ENST00000418358 1036 ntTSL 5 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CXorf40A-206ENST00000428236 887 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 KRTAP4-16-201ENST00000440582 708 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AL160270.2-201ENST00000441226 473 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AP000522.1-201ENST00000448070 121 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AOAH-IT1-201ENST00000449672 573 ntTSL 4 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC104619.1-201ENST00000459634 631 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 BRD9P2-201ENST00000506203 239 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-267P-201ENST00000516714 103 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 IGHVII-78-1-201ENST00000521105 269 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC026904.4-201ENST00000523038 559 ntTSL 4 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 ZSCAN9-208ENST00000531981 854 ntTSL 4 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 MIR4296-201ENST00000581038 88 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 RN7SL750P-201ENST00000582814 238 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CLEC4M-209ENST00000596707 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC068768.2-201ENST00000602352 343 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC022382.1-201ENST00000602768 336 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 MCRIP2P2-201ENST00000605276 209 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 SCARNA4-202ENST00000625402 129 ntBASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 EFCAB12-201ENST00000326085 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 EFCAB12-204ENST00000505956 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 OGDHL-202ENST00000419399 3588 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 FCAR-209ENST00000469767 1432 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC00663-201ENST00000586645 1357 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 TMC8-202ENST00000589691 3927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 CTCFL-201ENST00000243914 3567 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP3-3Q9BYR6 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 AC092123.2-201ENST00000611189 5421 ntBASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 NME6-205ENST00000421967 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 REEP1-201ENST00000165698 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 PROM1-207ENST00000508167 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 AC020904.2-201ENST00000621646 1669 ntTSL 3 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 PWAR5-201ENST00000624480 3180 ntBASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 CCDC36-203ENST00000438782 2843 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 REXO5-202ENST00000348433 2604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC01287-201ENST00000416982 2624 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 DPP4-201ENST00000360534 3904 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 RMI1-201ENST00000325875 3420 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 NLRP3-205ENST00000391827 2940 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC02172-201ENST00000507365 2264 ntTSL 4 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 AL008628.1-201ENST00000564198 5187 ntBASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 INTS9-213ENST00000521777 2430 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
KRTAP3-3Q9BYR6 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms