Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 RNA5SP339-201ENST00000390987 122 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL390774.1-201ENST00000411924 246 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 MRPS21P2-201ENST00000424704 264 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 RPS26P41-201ENST00000450370 284 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 COPS8P2-201ENST00000473228 627 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 OR8Q1P-201ENST00000526467 655 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC027026.1-201ENST00000532323 742 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC090022.1-201ENST00000546569 311 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 MIR4489-201ENST00000578869 62 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 FKBP1AP1-201ENST00000594588 318 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL139124.1-201ENST00000609123 421 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL512624.1-201ENST00000613638 469 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 WBP1LP8-201ENST00000617401 327 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 CASC19-264ENST00000641912 1184 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AL359715.3-201ENST00000569267 2123 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 AC083843.2-201ENST00000568248 6253 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 RN7SKP185-201ENST00000362813 326 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 RN7SKP59-201ENST00000410520 314 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 MGAT2P2-201ENST00000427194 797 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 DSTNP5-201ENST00000427921 523 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 RN7SL447P-201ENST00000494711 245 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC060766.1-201ENST00000590824 627 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AP000894.4-201ENST00000610185 483 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 MIR6837-201ENST00000620884 64 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 SAMMSON-209ENST00000641222 1100 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC104964.3-201ENST00000606115 2860 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 AC114774.1-201ENST00000507410 1770 ntBASIC5.47□□□□□ -1.53
ECHDC3Q96DC8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ECHDC3Q96DC8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
ECHDC3Q96DC8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.46□□□□□ -1.53
ECHDC3Q96DC8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ECHDC3Q96DC8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
ECHDC3Q96DC8 AC079097.1-201ENST00000512187 1399 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 RNU1-77P-201ENST00000390868 162 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 DBIP1-201ENST00000401435 260 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 AC073465.2-201ENST00000440938 498 ntBASIC5.46□□□□□ -1.54
ECHDC3Q96DC8 AL161722.1-201ENST00000446972 1032 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms