Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CASP4P49662 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CASP4P49662 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CASP4P49662 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 RN7SKP186-201ENST00000365371 303 ntBASIC5.89□□□□□ -1.47
CASP4P49662 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.89□□□□□ -1.47
CASP4P49662 RNU1-77P-201ENST00000390868 162 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CASP4P49662 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 GPS2P1-201ENST00000411761 986 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 RPS27AP6-201ENST00000427962 448 ntBASIC5.89□□□□□ -1.47
CASP4P49662 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 AC016724.1-201ENST00000453215 421 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 RN7SL51P-201ENST00000468230 285 ntBASIC5.89□□□□□ -1.47
CASP4P49662 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CASP4P49662 AC017007.3-201ENST00000479865 435 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AC058823.1-201ENST00000485315 474 ntBASIC5.89□□□□□ -1.47
CASP4P49662 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.89□□□□□ -1.47
CASP4P49662 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.89□□□□□ -1.47
CASP4P49662 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.89□□□□□ -1.47
CASP4P49662 NPM1P5-201ENST00000557228 838 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 AC007066.2-202ENST00000566531 914 ntBASIC5.89□□□□□ -1.47
CASP4P49662 RBM22P1-201ENST00000578589 1214 ntBASIC5.89□□□□□ -1.47
CASP4P49662 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.89□□□□□ -1.47
CASP4P49662 SUGT1P3-202ENST00000604259 383 ntBASIC5.89□□□□□ -1.47
CASP4P49662 RNA5SP439-201ENST00000617595 124 ntBASIC5.89□□□□□ -1.47
CASP4P49662 uc_338.7-201ENST00000621834 124 ntBASIC5.89□□□□□ -1.47
CASP4P49662 MIR8080-201ENST00000622224 89 ntBASIC5.89□□□□□ -1.47
CASP4P49662 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CASP4P49662 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CASP4P49662 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CASP4P49662 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CASP4P49662 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 AL354766.1-201ENST00000423396 542 ntBASIC5.88□□□□□ -1.47
CASP4P49662 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 AL672138.1-201ENST00000450604 1015 ntBASIC5.88□□□□□ -1.47
CASP4P49662 CR383656.1-201ENST00000484916 377 ntBASIC5.88□□□□□ -1.47
CASP4P49662 AC012123.2-201ENST00000485809 248 ntBASIC5.88□□□□□ -1.47
CASP4P49662 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 HMGB1P44-201ENST00000508597 572 ntBASIC5.88□□□□□ -1.47
CASP4P49662 AC021193.1-201ENST00000511607 420 ntBASIC5.88□□□□□ -1.47
CASP4P49662 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 AC097486.1-201ENST00000515331 210 ntBASIC5.88□□□□□ -1.47
CASP4P49662 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.88□□□□□ -1.47
CASP4P49662 SCARNA16.4-201ENST00000516956 187 ntBASIC5.88□□□□□ -1.47
CASP4P49662 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 MIR7853-201ENST00000584820 132 ntBASIC5.88□□□□□ -1.47
CASP4P49662 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.88□□□□□ -1.47
CASP4P49662 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.88□□□□□ -1.47
CASP4P49662 CASC19-248ENST00000641674 1356 ntBASIC5.88□□□□□ -1.47
CASP4P49662 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CASP4P49662 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.88□□□□□ -1.47
CASP4P49662 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CASP4P49662 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CASP4P49662 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms