Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 PPIAP9-201ENST00000403866 498 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL117344.1-201ENST00000407196 616 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP104-201ENST00000410989 118 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC009302.1-201ENST00000417147 390 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 CYP4F29P-201ENST00000420685 446 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 PDSS1P1-201ENST00000422953 1114 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 USP9YP4-201ENST00000424401 1745 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL589794.1-201ENST00000424971 390 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RWDD4P2-201ENST00000426392 563 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC009299.1-201ENST00000429684 717 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 OSTCP2-201ENST00000437956 444 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ATP6V1G1P4-201ENST00000438388 335 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SOCS5P1-201ENST00000440415 949 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC097359.1-201ENST00000447946 463 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 EEF1A1P28-201ENST00000450915 1403 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC093166.2-201ENST00000455969 1017 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SCARNA10-201ENST00000459255 330 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 GYG1P1-201ENST00000460864 698 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL236P-201ENST00000484759 284 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RWDD4P1-201ENST00000488019 565 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP249-201ENST00000516127 99 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC139697.1-201ENST00000548429 745 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS11-205ENST00000599561 430 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL760P-201ENST00000607344 270 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL139099.4-201ENST00000614802 114 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AC126474.2-201ENST00000623268 1750 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 CD86-204ENST00000469710 1604 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 SSXP3-201ENST00000442971 1300 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01613-201ENST00000561476 2780 ntBASIC2.89□□□□□ -1.95
CHKB-CPT1BH3BT56 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CARF-208ENST00000428585 2513 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CARF-203ENST00000414439 2099 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC011155.1-201ENST00000316512 456 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms