Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRP9P49458 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 AC092681.1-201ENST00000297369 291 ntBASIC4.91□□□□□ -1.62
SRP9P49458 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.91□□□□□ -1.62
SRP9P49458 OR56A4-201ENST00000330728 1209 ntBASIC4.91□□□□□ -1.62
SRP9P49458 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.91□□□□□ -1.62
SRP9P49458 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 MRPL53P1-201ENST00000414323 319 ntBASIC4.91□□□□□ -1.62
SRP9P49458 BX323845.3-201ENST00000428215 527 ntBASIC4.91□□□□□ -1.62
SRP9P49458 AL022331.1-201ENST00000429025 477 ntBASIC4.91□□□□□ -1.62
SRP9P49458 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.91□□□□□ -1.62
SRP9P49458 GAPDHP34-201ENST00000432112 823 ntBASIC4.91□□□□□ -1.62
SRP9P49458 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 TAAR4P-201ENST00000454843 1039 ntBASIC4.91□□□□□ -1.62
SRP9P49458 SNORD125-201ENST00000459538 96 ntBASIC4.91□□□□□ -1.62
SRP9P49458 RPS23P2-201ENST00000463671 415 ntBASIC4.91□□□□□ -1.62
SRP9P49458 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 AC022215.1-201ENST00000481770 362 ntBASIC4.91□□□□□ -1.62
SRP9P49458 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.91□□□□□ -1.62
SRP9P49458 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.91□□□□□ -1.62
SRP9P49458 AC021193.1-201ENST00000511607 420 ntBASIC4.91□□□□□ -1.62
SRP9P49458 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.91□□□□□ -1.62
SRP9P49458 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.91□□□□□ -1.62
SRP9P49458 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SRP9P49458 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 LSM3P2-201ENST00000551246 273 ntBASIC4.91□□□□□ -1.62
SRP9P49458 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 TMEM30CP-203ENST00000637814 1035 ntBASIC4.91□□□□□ -1.62
SRP9P49458 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SRP9P49458 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SRP9P49458 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SRP9P49458 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 AC104260.2-201ENST00000623551 3497 ntBASIC4.91□□□□□ -1.62
SRP9P49458 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRP9P49458 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
SRP9P49458 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
SRP9P49458 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.9□□□□□ -1.62
SRP9P49458 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.9□□□□□ -1.62
SRP9P49458 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SRP9P49458 TTC39DP-201ENST00000416781 1688 ntBASIC4.9□□□□□ -1.62
SRP9P49458 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.62
SRP9P49458 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.9□□□□□ -1.62
SRP9P49458 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SRP9P49458 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SRP9P49458 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SRP9P49458 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SRP9P49458 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRP9P49458 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRP9P49458 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.9□□□□□ -1.63
SRP9P49458 RNA5SP500-201ENST00000364486 119 ntBASIC4.9□□□□□ -1.63
SRP9P49458 RNA5SP510-201ENST00000364697 99 ntBASIC4.9□□□□□ -1.63
SRP9P49458 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRP9P49458 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRP9P49458 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.9□□□□□ -1.63
SRP9P49458 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.9□□□□□ -1.63
SRP9P49458 AC084754.1-201ENST00000463466 464 ntBASIC4.9□□□□□ -1.63
SRP9P49458 RN7SL570P-201ENST00000484405 292 ntBASIC4.9□□□□□ -1.63
SRP9P49458 AC023424.1-201ENST00000496058 459 ntBASIC4.9□□□□□ -1.63
SRP9P49458 AC090568.1-201ENST00000509499 856 ntBASIC4.9□□□□□ -1.63
SRP9P49458 SCARNA6.1-201ENST00000516989 238 ntBASIC4.9□□□□□ -1.63
SRP9P49458 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.9□□□□□ -1.63
SRP9P49458 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRP9P49458 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.9□□□□□ -1.63
SRP9P49458 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.9□□□□□ -1.63
SRP9P49458 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms