Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 AC093909.5-201ENST00000621839 1799 ntBASIC6.09□□□□□ -1.43
RB1P06400 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.09□□□□□ -1.43
RB1P06400 U8.4-201ENST00000363626 134 ntBASIC6.09□□□□□ -1.43
RB1P06400 RNA5SP30-201ENST00000365552 115 ntBASIC6.09□□□□□ -1.43
RB1P06400 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RB1P06400 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 AL607077.1-201ENST00000401718 499 ntBASIC6.09□□□□□ -1.43
RB1P06400 AC116036.1-201ENST00000412199 367 ntBASIC6.09□□□□□ -1.43
RB1P06400 CBX1P3-201ENST00000413296 527 ntBASIC6.09□□□□□ -1.43
RB1P06400 RN7SL222P-201ENST00000476452 299 ntBASIC6.09□□□□□ -1.43
RB1P06400 AC012123.2-201ENST00000485809 248 ntBASIC6.09□□□□□ -1.43
RB1P06400 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.09□□□□□ -1.43
RB1P06400 MIR2117-201ENST00000516780 80 ntBASIC6.09□□□□□ -1.43
RB1P06400 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.09□□□□□ -1.43
RB1P06400 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.09□□□□□ -1.43
RB1P06400 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.09□□□□□ -1.43
RB1P06400 AC016839.1-201ENST00000578162 867 ntBASIC6.09□□□□□ -1.43
RB1P06400 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.09□□□□□ -1.43
RB1P06400 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.09□□□□□ -1.43
RB1P06400 MAPK10-350ENST00000641777 965 ntBASIC6.09□□□□□ -1.43
RB1P06400 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.09□□□□□ -1.43
RB1P06400 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.09□□□□□ -1.43
RB1P06400 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
RB1P06400 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RB1P06400 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
RB1P06400 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RB1P06400 IMMTP1-201ENST00000435590 2219 ntBASIC6.09□□□□□ -1.44
RB1P06400 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.09□□□□□ -1.44
RB1P06400 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
RB1P06400 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RB1P06400 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.08□□□□□ -1.44
RB1P06400 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RB1P06400 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RB1P06400 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RB1P06400 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 AL645733.1-201ENST00000402250 217 ntBASIC6.08□□□□□ -1.44
RB1P06400 MTND3P20-201ENST00000407663 186 ntBASIC6.08□□□□□ -1.44
RB1P06400 GABARAPL3-201ENST00000412799 354 ntBASIC6.08□□□□□ -1.44
RB1P06400 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 CYCSP6-201ENST00000434498 302 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC015983.1-201ENST00000441577 373 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RB1P06400 AURKAPS1-201ENST00000451805 1212 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 RN7SL808P-201ENST00000496066 299 ntBASIC6.08□□□□□ -1.44
RB1P06400 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.08□□□□□ -1.44
RB1P06400 AC108043.1-201ENST00000512696 574 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.08□□□□□ -1.44
RB1P06400 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 MIR4646-201ENST00000580775 63 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC104785.1-201ENST00000603220 588 ntBASIC6.08□□□□□ -1.44
RB1P06400 BX322635.1-201ENST00000605804 496 ntBASIC6.08□□□□□ -1.44
RB1P06400 Mico1.1-201ENST00000611698 204 ntBASIC6.08□□□□□ -1.44
RB1P06400 AL049539.1-201ENST00000611964 459 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC090510.2-201ENST00000617465 629 ntBASIC6.08□□□□□ -1.44
RB1P06400 AL590410.1-201ENST00000617925 333 ntBASIC6.08□□□□□ -1.44
RB1P06400 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC104820.1-201ENST00000624183 307 ntBASIC6.08□□□□□ -1.44
RB1P06400 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RB1P06400 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.08□□□□□ -1.44
RB1P06400 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RB1P06400 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
RB1P06400 AC131971.1-201ENST00000332881 1482 ntBASIC6.08□□□□□ -1.44
RB1P06400 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.08□□□□□ -1.44
RB1P06400 AC073365.1-203ENST00000641055 1992 ntBASIC6.07□□□□□ -1.44
RB1P06400 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.07□□□□□ -1.44
RB1P06400 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.07□□□□□ -1.44
RB1P06400 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.07□□□□□ -1.44
RB1P06400 RN7SKP115-201ENST00000363177 317 ntBASIC6.07□□□□□ -1.44
RB1P06400 RNU6-697P-201ENST00000363348 107 ntBASIC6.07□□□□□ -1.44
RB1P06400 RNU6-670P-201ENST00000364312 104 ntBASIC6.07□□□□□ -1.44
RB1P06400 AL139039.2-201ENST00000407436 479 ntBASIC6.07□□□□□ -1.44
RB1P06400 RNU6-564P-201ENST00000410983 104 ntBASIC6.07□□□□□ -1.44
RB1P06400 AL356968.2-201ENST00000412769 1257 ntBASIC6.07□□□□□ -1.44
RB1P06400 TMA16P2-201ENST00000413187 601 ntBASIC6.07□□□□□ -1.44
RB1P06400 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.07□□□□□ -1.44
RB1P06400 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.07□□□□□ -1.44
RB1P06400 FAR2P1-206ENST00000449736 709 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC091685.2-201ENST00000454924 864 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms