Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AL355802.2-201ENST00000402069 882 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AC005829.2-201ENST00000571422 1056 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 HLA-B-256ENST00000639848 1089 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AL691432.2-201ENST00000607222 2038 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 AC083880.1-201ENST00000608266 535 ntBASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DRB4X5D2U9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 AC092368.3-202ENST00000574180 1591 ntBASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 AC060766.5-201ENST00000590539 871 ntBASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 TNXA-203ENST00000507684 2038 ntBASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 TMEM179-206ENST00000616017 1645 ntBASIC14.74□□□□□ -0.05
HLA-DRB4X5D2U9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms