Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 MIR6084-201ENST00000622012 110 ntBASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD3-BMI1R4GMX3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COMMD3-BMI1R4GMX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 AIRN-201ENST00000601203 4374 ntBASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 AP004607.4-201ENST00000530158 1459 ntBASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD3-BMI1R4GMX3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD3-BMI1R4GMX3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC079140.4-201ENST00000507448 529 ntBASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 KRT87P-202ENST00000534226 1464 ntBASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD3-BMI1R4GMX3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 AL354751.1-201ENST00000412768 1863 ntBASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms