Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 AL358472.4-201ENST00000633140 710 ntBASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN10AQ9Y5Y9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 UPK3BP1-201ENST00000428678 509 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 SLC25A1P2-201ENST00000430693 912 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 TSPY17P-201ENST00000450329 467 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 CA15P1-201ENST00000481698 905 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 AC092338.2-201ENST00000568827 1415 ntBASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN10AQ9Y5Y9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN10AQ9Y5Y9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 BX664615.1-201ENST00000443558 458 ntBASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 RNF152P1-201ENST00000397754 604 ntBASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 KRT8P41-201ENST00000533985 1514 ntBASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN10AQ9Y5Y9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AL359075.1-203ENST00000462729 1002 ntBASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AC141257.4-201ENST00000634557 245 ntBASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AC136944.6-201ENST00000634818 245 ntBASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AL160286.2-201ENST00000567150 934 ntBASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 AC139887.4-201ENST00000607877 719 ntBASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCN10AQ9Y5Y9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms