Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 HTR7P1-201ENST00000538670 1336 ntBASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AC233702.5-201ENST00000584107 538 ntBASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN16Q9Y5I7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 RPS2P55-201ENST00000397318 883 ntBASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 AC012618.2-201ENST00000428058 849 ntBASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 AC107956.1-201ENST00000494359 873 ntBASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 AL353708.3-201ENST00000610272 989 ntBASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN16Q9Y5I7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 AF186192.3-201ENST00000583427 947 ntBASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 KRT8P8-201ENST00000434750 1448 ntBASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN16Q9Y5I7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 AC093827.2-201ENST00000512654 315 ntBASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN16Q9Y5I7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms