Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB11Q9Y5F2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 AC133561.5-201ENST00000635547 218 ntBASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHB11Q9Y5F2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB11Q9Y5F2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 RARRES2P10-201ENST00000564312 460 ntBASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms