Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 UNC93B3-201ENST00000308076 687 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 AC099791.1-201ENST00000416440 715 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 AC079140.4-201ENST00000507448 529 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 TPRG1LP1-201ENST00000598702 760 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 AL358852.1-201ENST00000623174 1268 ntBASIC18.53■□□□□ 0.56
AP4S1Q9Y587 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
AP4S1Q9Y587 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 AC010141.2-201ENST00000452426 721 ntBASIC18.52■□□□□ 0.56
AP4S1Q9Y587 AC131281.2-201ENST00000520478 145 ntBASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
AP4S1Q9Y587 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.52■□□□□ 0.55
AP4S1Q9Y587 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 PCDHB18P-201ENST00000524813 2368 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AC024257.2-201ENST00000549699 147 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 SLC7A5P2-201ENST00000553010 536 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AC012414.1-201ENST00000556676 535 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AL035685.1-201ENST00000636663 812 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AL133373.2-201ENST00000623187 2828 ntBASIC18.51■□□□□ 0.55
AP4S1Q9Y587 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP4S1Q9Y587 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 AC090164.3-201ENST00000610780 2143 ntBASIC18.5■□□□□ 0.55
AP4S1Q9Y587 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms