Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP005212.1-201ENST00000581547 1997 ntBASIC20.55■□□□□ 0.88
YIPF1Q9Y548 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
YIPF1Q9Y548 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF1Q9Y548 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF1Q9Y548 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AC097488.1-201ENST00000507834 756 ntBASIC20.54■□□□□ 0.88
YIPF1Q9Y548 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AC011298.2-201ENST00000617989 482 ntBASIC20.54■□□□□ 0.88
YIPF1Q9Y548 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AL512408.1-201ENST00000569378 2000 ntBASIC20.54■□□□□ 0.88
YIPF1Q9Y548 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF1Q9Y548 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 CRYGFP-201ENST00000418459 633 ntBASIC20.53■□□□□ 0.88
YIPF1Q9Y548 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 KRT18P57-201ENST00000443599 1254 ntBASIC20.53■□□□□ 0.88
YIPF1Q9Y548 SLC25A3P1-201ENST00000443844 931 ntBASIC20.53■□□□□ 0.88
YIPF1Q9Y548 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 C2orf69P3-201ENST00000565542 1120 ntBASIC20.53■□□□□ 0.88
YIPF1Q9Y548 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF1Q9Y548 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 AC004951.3-201ENST00000418645 1148 ntBASIC20.52■□□□□ 0.88
YIPF1Q9Y548 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 AC008040.2-201ENST00000461049 708 ntBASIC20.52■□□□□ 0.88
YIPF1Q9Y548 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 AP000692.2-201ENST00000608391 879 ntBASIC20.52■□□□□ 0.88
YIPF1Q9Y548 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
YIPF1Q9Y548 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
YIPF1Q9Y548 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
YIPF1Q9Y548 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 TERF1P1-201ENST00000311003 1181 ntBASIC20.51■□□□□ 0.87
YIPF1Q9Y548 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 SLC25A1P4-201ENST00000567977 778 ntBASIC20.51■□□□□ 0.87
YIPF1Q9Y548 AC130371.2-201ENST00000619443 611 ntBASIC20.51■□□□□ 0.87
YIPF1Q9Y548 FEM1AP1-201ENST00000431297 1995 ntBASIC20.51■□□□□ 0.87
YIPF1Q9Y548 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF1Q9Y548 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 Z85996.1-201ENST00000494644 937 ntBASIC20.5■□□□□ 0.87
YIPF1Q9Y548 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF1Q9Y548 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms