Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 AC136469.2-201ENST00000623944 1028 ntBASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH1Q9Y2L9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 MIR3181-201ENST00000578512 73 ntBASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH1Q9Y2L9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 AC009053.2-201ENST00000563701 2365 ntBASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 OR2I1P-207ENST00000453522 948 ntBASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 SUDS3P1-201ENST00000505831 966 ntBASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 AL031432.3-201ENST00000607698 485 ntBASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 MIR2861-201ENST00000636310 90 ntBASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRCH1Q9Y2L9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH1Q9Y2L9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH1Q9Y2L9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH1Q9Y2L9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRCH1Q9Y2L9 DPP3P2-201ENST00000416030 1696 ntBASIC18.58■□□□□ 0.57
LRCH1Q9Y2L9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRCH1Q9Y2L9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms