Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 AL591742.1-201ENST00000604433 565 ntBASIC17.2■□□□□ 0.34
DUX4Q9UBX2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 AC121338.2-201ENST00000622535 1744 ntBASIC17.2■□□□□ 0.34
DUX4Q9UBX2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
DUX4Q9UBX2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 AC006970.2-201ENST00000450065 779 ntBASIC17.19■□□□□ 0.34
DUX4Q9UBX2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.19■□□□□ 0.34
DUX4Q9UBX2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 AC116050.2-201ENST00000612102 1779 ntBASIC17.19■□□□□ 0.34
DUX4Q9UBX2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX4Q9UBX2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AC007322.3-201ENST00000426526 701 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AC093787.1-201ENST00000450396 207 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AC004408.2-201ENST00000623613 2777 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AP000974.1-201ENST00000623909 2387 ntBASIC17.18■□□□□ 0.34
DUX4Q9UBX2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
DUX4Q9UBX2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX4Q9UBX2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX4Q9UBX2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX4Q9UBX2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX4Q9UBX2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX4Q9UBX2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms