Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HACD3Q9P035 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 POM121L13P-201ENST00000422362 380 ntBASIC19.84■□□□□ 0.77
HACD3Q9P035 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.84■□□□□ 0.77
HACD3Q9P035 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HACD3Q9P035 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.84■□□□□ 0.77
HACD3Q9P035 AL121829.2-201ENST00000620908 328 ntBASIC19.84■□□□□ 0.77
HACD3Q9P035 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.84■□□□□ 0.77
HACD3Q9P035 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.84■□□□□ 0.77
HACD3Q9P035 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HACD3Q9P035 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HACD3Q9P035 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
HACD3Q9P035 AC026366.1-201ENST00000488803 879 ntBASIC19.83■□□□□ 0.77
HACD3Q9P035 CD99P1-205ENST00000527459 561 ntBASIC19.83■□□□□ 0.77
HACD3Q9P035 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HACD3Q9P035 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.83■□□□□ 0.77
HACD3Q9P035 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.83■□□□□ 0.77
HACD3Q9P035 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
HACD3Q9P035 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HACD3Q9P035 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HACD3Q9P035 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.83■□□□□ 0.76
HACD3Q9P035 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HACD3Q9P035 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.83■□□□□ 0.76
HACD3Q9P035 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HACD3Q9P035 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HACD3Q9P035 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.82■□□□□ 0.76
HACD3Q9P035 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.82■□□□□ 0.76
HACD3Q9P035 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.82■□□□□ 0.76
HACD3Q9P035 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 AC008403.3-201ENST00000598924 454 ntBASIC19.82■□□□□ 0.76
HACD3Q9P035 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HACD3Q9P035 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 TFP1-202ENST00000475455 1573 ntBASIC19.82■□□□□ 0.76
HACD3Q9P035 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.82■□□□□ 0.76
HACD3Q9P035 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HACD3Q9P035 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.81■□□□□ 0.76
HACD3Q9P035 PCDHAC2-203ENST00000615316 3011 ntBASIC19.81■□□□□ 0.76
HACD3Q9P035 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HACD3Q9P035 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.81■□□□□ 0.76
HACD3Q9P035 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
HACD3Q9P035 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
HACD3Q9P035 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.81■□□□□ 0.76
HACD3Q9P035 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.81■□□□□ 0.76
HACD3Q9P035 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.81■□□□□ 0.76
HACD3Q9P035 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HACD3Q9P035 AC124283.5-201ENST00000624661 1809 ntBASIC19.81■□□□□ 0.76
HACD3Q9P035 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HACD3Q9P035 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.8■□□□□ 0.76
HACD3Q9P035 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
HACD3Q9P035 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.8■□□□□ 0.76
HACD3Q9P035 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.8■□□□□ 0.76
HACD3Q9P035 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
HACD3Q9P035 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
HACD3Q9P035 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms