Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDE1Q9NXR1 AC135279.3-201ENST00000610945 1311 ntBASIC18.99■□□□□ 0.63
NDE1Q9NXR1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 AL356441.2-201ENST00000443009 864 ntBASIC18.98■□□□□ 0.63
NDE1Q9NXR1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 AL136162.1-201ENST00000607711 1078 ntBASIC18.98■□□□□ 0.63
NDE1Q9NXR1 AC243732.1-201ENST00000612648 864 ntBASIC18.98■□□□□ 0.63
NDE1Q9NXR1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDE1Q9NXR1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 AC091799.1-201ENST00000422823 811 ntBASIC18.97■□□□□ 0.63
NDE1Q9NXR1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 AC105265.2-201ENST00000467189 838 ntBASIC18.97■□□□□ 0.63
NDE1Q9NXR1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 CROCCP3-202ENST00000420820 1947 ntBASIC18.97■□□□□ 0.63
NDE1Q9NXR1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.97■□□□□ 0.63
NDE1Q9NXR1 AC009113.1-201ENST00000570267 2443 ntBASIC18.96■□□□□ 0.63
NDE1Q9NXR1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 AC097381.1-201ENST00000429019 1296 ntBASIC18.96■□□□□ 0.63
NDE1Q9NXR1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDE1Q9NXR1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 KRT16P6-202ENST00000425692 1426 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 AC135050.7-201ENST00000624508 2218 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L2-201ENST00000561772 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms