Protein–RNA interactions for Protein: Q9NXJ5

PGPEP1, Pyroglutamyl-peptidase 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1Q9NXJ5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 RN7SL440P-201ENST00000577855 343 ntBASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 AP000240.1-201ENST00000609910 452 ntBASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 KRT87P-202ENST00000534226 1464 ntBASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PGPEP1Q9NXJ5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 AC027702.1-201ENST00000563810 1770 ntBASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 CROCCP5-201ENST00000436658 830 ntBASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 AC005224.4-201ENST00000583262 1652 ntBASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PGPEP1Q9NXJ5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 AL355802.2-201ENST00000402069 882 ntBASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 AC040160.2-201ENST00000623816 1675 ntBASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PGPEP1Q9NXJ5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.08□□□□□ -0.15
PGPEP1Q9NXJ5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 AC020907.5-201ENST00000624372 1936 ntBASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 AC006518.1-201ENST00000541449 943 ntBASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 AL121832.2-201ENST00000610979 668 ntBASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PGPEP1Q9NXJ5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms