Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 AC125437.2-201ENST00000625180 2167 ntBASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CUEDC1Q9NWM3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 MTDHP1-201ENST00000605323 784 ntBASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CUEDC1Q9NWM3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.97■□□□□ 0.63
CUEDC1Q9NWM3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC1Q9NWM3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 ECEL1P3-201ENST00000427961 737 ntBASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 MIR4497-201ENST00000583208 89 ntBASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 AL023875.1-201ENST00000640777 796 ntBASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC1Q9NWM3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms