Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.6■■□□□ 1.05
TRMT13Q9NUP7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRMT13Q9NUP7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRMT13Q9NUP7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRMT13Q9NUP7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.6■■□□□ 1.05
TRMT13Q9NUP7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 SLC25A1P2-201ENST00000430693 912 ntBASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
TRMT13Q9NUP7 TMEM179-206ENST00000616017 1645 ntBASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 Z85996.1-201ENST00000494644 937 ntBASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
TRMT13Q9NUP7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRMT13Q9NUP7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 TSPY5P-201ENST00000426936 936 ntBASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.57■■□□□ 1.04
TRMT13Q9NUP7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 AC092338.2-201ENST00000568827 1415 ntBASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 COX11P1-201ENST00000489116 835 ntBASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.56■■□□□ 1.04
TRMT13Q9NUP7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 AC026310.3-201ENST00000625186 2373 ntBASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms