Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC008687.6-201ENST00000596318 630 ntBASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 KRT8P20-201ENST00000423953 1409 ntBASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 AC112907.3-201ENST00000577781 2400 ntBASIC18.79■□□□□ 0.6
NECTIN3Q9NQS3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN3Q9NQS3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 HLA-G-202ENST00000376815 851 ntBASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 HLA-G-203ENST00000376818 1127 ntBASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 AC006058.3-201ENST00000606217 1069 ntBASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 AL512408.1-201ENST00000569378 2000 ntBASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NECTIN3Q9NQS3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.77■□□□□ 0.59
NECTIN3Q9NQS3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 AC120498.8-201ENST00000614275 531 ntBASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 AC116562.4-201ENST00000641316 2276 ntBASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN3Q9NQS3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms