Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 CYP2T1P-201ENST00000432607 1285 ntBASIC17.71■□□□□ 0.43
HINT3Q9NQE9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 AC083906.2-201ENST00000511578 360 ntBASIC17.71■□□□□ 0.43
HINT3Q9NQE9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
HINT3Q9NQE9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 PHGDH-210ENST00000641115 1638 ntBASIC17.71■□□□□ 0.43
HINT3Q9NQE9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
HINT3Q9NQE9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 KRT18P68-201ENST00000392293 1000 ntBASIC17.7■□□□□ 0.42
HINT3Q9NQE9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 AF201337.1-201ENST00000520239 748 ntBASIC17.7■□□□□ 0.42
HINT3Q9NQE9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 AL109923.1-201ENST00000618799 583 ntBASIC17.7■□□□□ 0.42
HINT3Q9NQE9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HINT3Q9NQE9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 LINC01465-201ENST00000408887 1940 ntBASIC17.69■□□□□ 0.42
HINT3Q9NQE9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 HLA-G-202ENST00000376815 851 ntBASIC17.69■□□□□ 0.42
HINT3Q9NQE9 HLA-G-203ENST00000376818 1127 ntBASIC17.69■□□□□ 0.42
HINT3Q9NQE9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 AC105036.2-201ENST00000569468 176 ntBASIC17.69■□□□□ 0.42
HINT3Q9NQE9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 OR10C1-204ENST00000622521 1039 ntBASIC17.69■□□□□ 0.42
HINT3Q9NQE9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HINT3Q9NQE9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HINT3Q9NQE9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms