Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SSU72Q9NP77 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.5■□□□□ 0.71
SSU72Q9NP77 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.49■□□□□ 0.71
SSU72Q9NP77 AC010536.3-201ENST00000620306 533 ntBASIC19.49■□□□□ 0.71
SSU72Q9NP77 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSU72Q9NP77 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSU72Q9NP77 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSU72Q9NP77 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
SSU72Q9NP77 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SSU72Q9NP77 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSU72Q9NP77 Z98044.1-201ENST00000632503 1764 ntBASIC19.47■□□□□ 0.71
SSU72Q9NP77 AL390961.4-201ENST00000623958 2535 ntBASIC19.47■□□□□ 0.71
SSU72Q9NP77 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 AC090164.3-201ENST00000610780 2143 ntBASIC19.46■□□□□ 0.71
SSU72Q9NP77 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SSU72Q9NP77 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSU72Q9NP77 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 AL139246.5-201ENST00000606645 996 ntBASIC19.45■□□□□ 0.7
SSU72Q9NP77 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSU72Q9NP77 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.45■□□□□ 0.7
SSU72Q9NP77 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms