Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 RN7SL471P-201ENST00000580476 299 ntBASIC16.75■□□□□ 0.27
GCM1Q9NP62 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 AL691432.2-201ENST00000607222 2038 ntBASIC16.75■□□□□ 0.27
GCM1Q9NP62 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GCM1Q9NP62 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.75■□□□□ 0.27
GCM1Q9NP62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GCM1Q9NP62 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GCM1Q9NP62 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 AC116351.2-201ENST00000606540 1585 ntBASIC16.73■□□□□ 0.27
GCM1Q9NP62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 PRKY-204ENST00000533551 1019 ntBASIC16.73■□□□□ 0.27
GCM1Q9NP62 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GCM1Q9NP62 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 AC018553.1-201ENST00000616682 1458 ntBASIC16.73■□□□□ 0.27
GCM1Q9NP62 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.73■□□□□ 0.27
GCM1Q9NP62 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GCM1Q9NP62 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GCM1Q9NP62 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms